📄️ Add docker pipeline
Creating a custom workflow on Basepair
📄️ Add nextflow pipeline
Nextflow Integration
📄️ Custom pipeline
Introduction
📄️ Custom modules
Introduction
📄️ Pipeline YAML
You may configure the pipeline parameters in a YAML file.
Pipelines
Many commonly used best-practices piplines are available for a variety of genomic assays including bulk and single-cell RNA-seq, WGS, WES/panel, ATAC-seq, CUT&RUN, CUT&TAG, ChIP-seq, metagenomics and more! Users may add their own custom pipelines as well.